.. |
CAFS_divergence
|
academic/CAFS_divergence: Added (functional shift clustering).
|
9 years ago |
CAPS_coevolution
|
academic/CAPS_coevolution: Added (Coevolution Analysis).
|
9 years ago |
Data2FCS
|
academic/Data2FCS: Added (Data2FCS and FCS2Data).
|
9 years ago |
EMBASSY
|
Multiple: update email, year and slack-desc
|
10 years ago |
EMBOSS
|
academic/EMBOSS: Make .desktop validate.
|
9 years ago |
FCSalyzer
|
academic/FCSalyzer: Updated for version 0.9.15_alpha.
|
7 years ago |
Gblocks
|
academic/Gblocks: Fix download url.
|
8 years ago |
GeoGebra
|
academic/GeoGebra: Update homepage.
|
7 years ago |
Gridcoin-Research
|
academic/Gridcoin-Research: Updated for version 3.7.16.0.
|
7 years ago |
HMMER
|
academic/HMMER: Updated for version 3.2.1.
|
7 years ago |
ITK
|
academic/ITK: Updated for version 4.13.1.
|
7 years ago |
ImageJ
|
academic/ImageJ: Updated for version 1.52.
|
7 years ago |
Kst
|
academic/Kst: Update doinst.sh.
|
9 years ago |
Mnemosyne
|
academic/Mnemosyne: Fix whitespaces.
|
8 years ago |
OpenFOAM
|
academic/OpenFOAM: Updated for version 6.
|
7 years ago |
PhyML
|
academic/PhyML: Updated for version 3.3.20180621.
|
7 years ago |
PyAMG
|
academic/PyAMG: Update HOMEPAGE.
|
8 years ago |
QtiPlot
|
academic/QtiPlot: Updated homepage.
|
8 years ago |
R
|
academic/R: Updated for version 3.5.1.
|
7 years ago |
RepeatMasker
|
academic/RepeatMasker: Added (Screen DNA sequence).
|
8 years ago |
STAR
|
academic/STAR: Updated for version 2.6.1a.
|
7 years ago |
Shark
|
academic/Shark: Added (machine learning library).
|
8 years ago |
TreeGraph
|
academic/TreeGraph: Added (A feature rich phylogenetic tree editor).
|
7 years ago |
WordNet
|
academic/WordNet: Switch homepage to https.
|
8 years ago |
Xyce
|
academic/Xyce: Update info.
|
7 years ago |
ZeGrapher
|
academic/ZeGrapher: Added (math graphing).
|
8 years ago |
abntex
|
academic/abntex: New homepage.
|
9 years ago |
aenig4
|
academic/aenig4: Added (Enigma M4 Cipher Machine Emulator).
|
9 years ago |
aline
|
academic/aline: Fix README.
|
9 years ago |
aliview
|
academic/aliview: Updated for version 1.23.
|
7 years ago |
amd
|
academic/amd: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
amplicon
|
academic/amplicon: Make .desktop validate.
|
9 years ago |
amplifx
|
academic/amplifx: Fix README.
|
9 years ago |
antiprism
|
academic/antiprism: Fix DOWNLOAD.
|
10 years ago |
archaeopteryx
|
academic/archaeopteryx: Updated for version 0.9920b.
|
8 years ago |
aris
|
various: Update find command to match template.
|
12 years ago |
arka
|
academic/arka: Make .desktop validate.
|
9 years ago |
armadillo
|
academic/armadillo: Updated for version 8.100.0.
|
8 years ago |
arpack
|
academic/arpack: new maintainer.
|
9 years ago |
arpack-ng
|
academic/arpack-ng: Updated for version 3.5.0.
|
9 years ago |
artha
|
academic/artha: Mirror download url.
|
8 years ago |
avl
|
academic/avl: Updated for version 3.36.
|
9 years ago |
avogadro
|
academic/avogadro: Mirror download url.
|
8 years ago |
bedGraphToBigWig
|
academic/bedGraphToBigWig: Added (Convert bedGraph to bigWig file)
|
10 years ago |
bedtools
|
academic/bedtools: Updated for version 2.27.1.
|
8 years ago |
biblesync
|
academic/biblesync: Updated for version 2.0.1.
|
8 years ago |
bibletime
|
academic/bibletime: Updated for version 2.11.2.
|
7 years ago |
bibus
|
academic/bibus: New maintainer.
|
9 years ago |
boinc
|
academic/boinc: Added (Open-source software for grid computing).
|
7 years ago |
bowtie
|
Multiple: update email, year and slack-desc
|
10 years ago |
bowtie2
|
Multiple: update email, year and slack-desc
|
10 years ago |
bpp-core
|
academic/bpp-core: Updated for version 2.4.0.
|
7 years ago |
bpp-phyl
|
academic/bpp-phyl: Updated for version 2.4.0.
|
7 years ago |
bpp-phyl-omics
|
academic/bpp-phyl-omics: Updated for version 2.4.0.
|
7 years ago |
bpp-popgen
|
academic/bpp-popgen: Updated for version 2.4.0.
|
7 years ago |
bpp-seq
|
academic/bpp-seq: Updated for version 2.4.0.
|
7 years ago |
bpp-seq-omics
|
academic/bpp-seq-omics: Updated for version 2.4.0.
|
7 years ago |
bppsuite
|
academic/bppsuite: Updated for version 2.4.0.
|
7 years ago |
btf
|
academic/btf: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
bwa
|
academic/bwa: Updated for version 0.7.17.
|
8 years ago |
cadabra2
|
academic/cadabra2: Fix DOWNLOAD url.
|
8 years ago |
calc
|
academic/calc: Updated for version 2.12.6.5.
|
8 years ago |
calcoo
|
academic/calcoo: Fix ownership.
|
8 years ago |
camd
|
academic/camd: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
cap3
|
Multiple: update email, year and slack-desc
|
10 years ago |
cblas
|
academic/cblas: Updated for version 3.8.0.
|
8 years ago |
ccolamd
|
academic/ccolamd: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
celestia
|
academic/celestia: Allow VERSION override, i486=>i586.
|
9 years ago |
chemtool
|
academic/chemtool: Update doinst.sh.
|
9 years ago |
cholmod
|
academic/cholmod: Updated for version 3.0.12.
|
8 years ago |
cistrome-CEAS
|
Multiple: update email, year and slack-desc
|
10 years ago |
cistrome-MACS
|
Multiple: update email, year and slack-desc
|
10 years ago |
cistrome-conductGO
|
academic/cistrome-conductGO: Fix ownership.
|
8 years ago |
cistrome-extra
|
academic/cistrome-extra: Updated for version git_20170829_6334683.
|
8 years ago |
cistrome-mdseqpos
|
academic/cistrome-mdseqpos: Updated for v. git_20170829_6334683.
|
8 years ago |
cld2
|
academic/cld2: Fix build on current.
|
8 years ago |
clustalo
|
academic/clustalo: Updated for version 1.2.4.
|
9 years ago |
clustalw
|
Multiple: update email, year and slack-desc
|
10 years ago |
clustalx
|
academic/clustalx: Make .desktop validate.
|
9 years ago |
colamd
|
academic/colamd: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
convertall
|
academic/convertall: Update doinst.sh.
|
9 years ago |
copasi
|
academic/copasi: Fix DOWNLOAD_x86_64.
|
7 years ago |
coq
|
academic/coq: Updated for version 8.5pl1.
|
9 years ago |
cryptominisat
|
academic/cryptominisat: Added (SAT solver).
|
7 years ago |
csparse
|
academic/csparse: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
cufflinks
|
Multiple: update email, year and slack-desc
|
10 years ago |
cutadapt
|
academic/cutadapt: Updated for version 1.14.
|
8 years ago |
cxsparse
|
academic/cxsparse: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
dakota
|
academic/dakota: Updated for version 6.8.
|
7 years ago |
drawtiming
|
academic/drawtiming: Update doinst.sh.
|
9 years ago |
ds9
|
academic/ds9: Updated for version 7.6.
|
8 years ago |
easy_spice
|
academic/easy_spice: Use tgz.
|
8 years ago |
edsim51di
|
academic/edsim51di: Updated for version 2.1.20.
|
8 years ago |
engauge
|
academic/engauge: Updated for version 10.10.
|
7 years ago |
ent
|
academic/ent: Fix license URL.
|
9 years ago |
equalx
|
academic/equalx: Fix slack-desc.
|
9 years ago |
ess
|
academic/ess: Updated for version 17.11.
|
7 years ago |
evopedia_qt
|
academic/evopedia_qt: Fix slack-desc.
|
9 years ago |
exonerate
|
academic/exonerate: Switch to https.
|
8 years ago |
extrema
|
academic/extrema: New maintainer.
|
9 years ago |
fann
|
academic/fann: Fix slack-desc.
|
9 years ago |
fastqc
|
academic/fastqc: Updated for version 0.11.7.
|
7 years ago |
fet
|
academic/fet: Updated for version 5.36.1.
|
7 years ago |
finchtv
|
academic/finchtv: Updated for version 1.3.1.
|
8 years ago |
fityk
|
academic/fityk: Added (nonlinear curve fitting).
|
9 years ago |
flann
|
academic/flann: Updated for version 1.9.1 + new maintainer.
|
9 years ago |
flashqard
|
academic/flashqard: Update doinst.sh.
|
9 years ago |
flexbar
|
academic/flexbar: Updated for version 3.4.0.
|
7 years ago |
free42
|
academic/free42: Updated for version 2.0.4.
|
8 years ago |
freechartgeany
|
academic/freechartgeany: Update doinst.sh.
|
9 years ago |
g3data
|
academic/g3data: new maintainer.
|
9 years ago |
galculator
|
academic/galculator: Fix download url.
|
8 years ago |
gaw3
|
academic/gaw3: Updated for version 20170716.
|
8 years ago |
gcalctool
|
academic/gcalctool: Update HOMEPAGE url.
|
9 years ago |
gchemutils
|
academic/gchemutils: Updated for version 0.14.17.
|
7 years ago |
gcompris
|
academic/gcompris: Updated for version 17.05.
|
8 years ago |
geda-gaf
|
academic/geda-gaf: Update doinst.sh.
|
9 years ago |
gelemental
|
academic/gelemental: Update doinst.sh.
|
9 years ago |
geneconv
|
academic/geneconv: Switch to https.
|
8 years ago |
genius
|
academic/genius: Updated for version 1.0.23.
|
8 years ago |
genometools
|
academic/genometools: Updated for version 1.5.10.
|
7 years ago |
genpak
|
Multiple: update email, year and slack-desc
|
10 years ago |
geomview
|
academic/geomview: Fix slack-desc.
|
9 years ago |
gerbv
|
academic/gerbv: Update doinst.sh.
|
9 years ago |
ggobi
|
academic/ggobi: Allow VERSION override, i486=>i586.
|
9 years ago |
ghemical
|
academic/ghemical: Update doinst.sh.
|
9 years ago |
glpk
|
academic/glpk: Updated for version 4.61 + new maintainer.
|
9 years ago |
gnucap
|
academic/gnucap: Update doinst.sh.
|
9 years ago |
gp2fasta
|
academic/gp2fasta: Update HOMEPAGE and DOWNLOAD urls.
|
8 years ago |
gpredict
|
academic/gpredict: Updated for version 2.2.1 + new maintainer.
|
7 years ago |
grace
|
academic/grace: i486=>i586.
|
9 years ago |
gresistor
|
academic/gresistor: Updated homepage
|
9 years ago |
gretl
|
academic/gretl: Updated for version 2017c.
|
8 years ago |
grpn
|
academic/grpn: Fix slack-desc.
|
9 years ago |
gspiceui
|
academic/gspiceui: Updated for version 1.1.00.
|
8 years ago |
gtkwave
|
academic/gtkwave: Fix slack-desc.
|
9 years ago |
gtypist
|
academic/gtypist: Make .desktop validate.
|
9 years ago |
gwyddion
|
academic/gwyddion: Updated for version 2.51.
|
7 years ago |
hyphy
|
academic/hyphy: Updated for version 2.3.13.
|
7 years ago |
iTest
|
academic/iTest: Fix slack-desc.
|
9 years ago |
ij-plugins-LOCI
|
academic/ij-plugins-LOCI: Updated for version 5.8.2.
|
7 years ago |
ij-plugins-UCSD
|
Multiple: update email, year and slack-desc
|
10 years ago |
io_lib
|
academic/io_lib: Updated for version 1.14.9.
|
9 years ago |
irsim
|
academic/irsim: Fix slack-desc.
|
9 years ago |
isoelectric-point
|
academic/isoelectric-point: Make .desktop validate.
|
9 years ago |
itex2mml
|
academic/itex2mml: Remove obsolete patch.
|
8 years ago |
jalview
|
academic/jalview: Updated for version 2.10.0b1.
|
9 years ago |
jpicedt
|
academic/jpicedt: Fix VERSION.
|
10 years ago |
jugglinglab
|
academic/jugglinglab: Make .desktop validate.
|
9 years ago |
karma
|
academic/karma: Fix library issue.
|
8 years ago |
kile
|
academic/kile: Update doinst.sh.
|
9 years ago |
klavaro
|
academic/klavaro: Update doinst.sh.
|
9 years ago |
klu
|
academic/klu: Updated for version 1.3.9.
|
8 years ago |
knime
|
academic/knime: Fix ownership.
|
8 years ago |
ktikz
|
academic/ktikz: Update doinst.sh.
|
9 years ago |
kurso
|
academic/kurso: Update doinst.sh.
|
9 years ago |
labplot2
|
academic/labplot2: Updated for version 2.4.0.
|
9 years ago |
ladr
|
academic/ladr: Switch homepage and download to https.
|
7 years ago |
lalnview
|
academic/lalnview: Fix README.
|
9 years ago |
lapack95
|
academic/lapack95: New maintainer.
|
9 years ago |
lapacke
|
academic/lapacke: Updated for version 3.8.0.
|
8 years ago |
ldl
|
academic/ldl: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
libghemical
|
various: Update find command to match template.
|
12 years ago |
libqalculate
|
academic/libqalculate: Updated for version 2.2.0
|
8 years ago |
link-grammar
|
academic/link-grammar: Update DEP.
|
9 years ago |
loggerpro
|
academic/loggerpro: Update homepage.
|
7 years ago |
lpsolve
|
academic/lpsolve: Updated for version 5.5.2.5.
|
9 years ago |
mafft
|
academic/mafft: Updated for version 7.402.
|
7 years ago |
magic
|
academic/magic: Added (A VLSI layout design tool).
|
9 years ago |
mathics
|
academic/mathics: Updated for version 1.0.
|
9 years ago |
mathomatic
|
academic/mathomatic: Fix slack-desc.
|
9 years ago |
matio
|
academic/matio: Added (MAT File I/O Library).
|
9 years ago |
maxima
|
academic/maxima: Updated for version 5.39.0 + new maintainer.
|
9 years ago |
megax
|
academic/megax: Added (Molecular Evolutionary Genetics Analysis).
|
7 years ago |
meme-suite
|
academic/meme-suite: Added (Motif based sequence analysis tools).
|
8 years ago |
mendeleydesktop
|
academic/mendeleydesktop: Updated homepage link.
|
9 years ago |
metis
|
academic/metis: Updated for version 5.1.0.
|
9 years ago |
mkDSSP
|
Multiple: update email, year and slack-desc
|
10 years ago |
mpmath
|
academic/mpmath: Switch to i586.
|
8 years ago |
mrbayes
|
academic/mrbayes: Fixed download url.
|
7 years ago |
muscle
|
Multiple: update email, year and slack-desc
|
10 years ago |
ncbi-blast
|
academic/ncbi-blast: Updated downloar urls.
|
8 years ago |
ncbi-blast-plus
|
academic/ncbi-blast-plus: Updated for version 2.7.1.
|
8 years ago |
ncbi-rmblastn
|
academic/ncbi-rmblastn: Added (NCBI RMBlast).
|
8 years ago |
ncview
|
academic/ncview: Added (a netCDF visual browser).
|
8 years ago |
ngspice
|
academic/ngspice: Updated for version 28.
|
7 years ago |
novocraft
|
academic/novocraft: Updated for version 3.08.02.
|
8 years ago |
octave
|
academic/octave: Updated for version 4.2.2.
|
8 years ago |
pal2nal
|
academic/pal2nal: Updated for version 14.1.
|
8 years ago |
paml
|
academic/paml: Updated for version 4.9h.
|
7 years ago |
pamlX
|
academic/pamlX: Updated to build with paml-4.9h.
|
7 years ago |
papi
|
academic/papi: Fixed ownership.
|
8 years ago |
pari
|
academic/pari: Updated for version 2.11.0.
|
7 years ago |
parmetis
|
academic/parmetis: Update info.
|
7 years ago |
patsy
|
academic/patsy: Fix slack-desc.
|
9 years ago |
pcb
|
academic/pcb: Updated for version 4.0.2.
|
8 years ago |
perlprimer
|
academic/perlprimer: Updated for version 1.2.3_f7d3bd0.
|
7 years ago |
pianobooster
|
academic/pianobooster: i486 => i586.
|
9 years ago |
plasmidomics
|
Multiple: update email, year and slack-desc
|
10 years ago |
prank-msa
|
academic/prank-msa: Updated for version 170427.
|
8 years ago |
primer3
|
academic/primer3: Updated for version 2.4.0.
|
7 years ago |
pspp
|
academic/pspp: Updated for version 1.0.1.
|
7 years ago |
pulseview
|
academic/pulseview: Switch to https.
|
8 years ago |
pyCRAC
|
academic/pyCRAC: Updated for version 1.3.2.
|
7 years ago |
pyfits
|
academic/pyfits: Update download url.
|
8 years ago |
pysam
|
academic/pysam: Change EMAIL.
|
7 years ago |
qalculate-gtk
|
academic/qalculate-gtk: Updated for version 2.2.0
|
8 years ago |
qcl
|
academic/qcl: Added (A Programming Language for Quantum Computers).
|
8 years ago |
qhull
|
academic/qhull: Updated for version 2015.2.
|
8 years ago |
qrupdate
|
academic/qrupdate: Improve BLAS/LAPACK support + New maintainer.
|
9 years ago |
qtoctave
|
academic/qtoctave: Mirror download url.
|
8 years ago |
qucs
|
academic/qucs: Noted orphan status (no SBo maintainer).
|
7 years ago |
rbio
|
academic/rbio: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
reduce-algebra
|
academic/reduce-algebra: Updated for version 20180920svn4765.
|
7 years ago |
root
|
academic/root: Fix slack-desc.
|
9 years ago |
sage
|
academic/sage: Unmaintained.
|
7 years ago |
sage-bin
|
academic/sage-bin: Added (python based mathematics software).
|
7 years ago |
samtools
|
Multiple: update email, year and slack-desc
|
10 years ago |
scidavis
|
academic/scidavis: Patched to fix crashes.
|
7 years ago |
scilab
|
academic/scilab: Updated for version 6.0.1.
|
7 years ago |
scipy
|
academic/scipy: Switch homepage to https.
|
7 years ago |
scipy3
|
academic/scipy3: Update HOMEPAGE.
|
9 years ago |
seaview
|
academic/seaview: Updated for version 4.7.
|
7 years ago |
sequence-analysis
|
academic/sequence-analysis: Make .desktop validate.
|
9 years ago |
sigrok-cli
|
academic/sigrok-cli: Switch to https.
|
8 years ago |
siril
|
academic/siril: Fix doc ownership, use our cflags.
|
8 years ago |
slatec
|
various: Update find command to match template.
|
12 years ago |
smath-studio
|
academic/smath-studio: Changed maintainer.
|
7 years ago |
snpEff
|
academic/snpEff: Updated for version 4.3t.
|
8 years ago |
solfege
|
academic/solfege: Update HOMEPAGE and DOWNLOAD urls.
|
8 years ago |
spades
|
academic/spades: Updated for version 3.12.0.
|
7 years ago |
speedcrunch
|
academic/speedcrunch: Fixed tarball handling.
|
8 years ago |
spiceopus
|
academic/spiceopus: Update doinst.sh.
|
9 years ago |
spidey
|
academic/spidey: Update HOMEPAGE.
|
9 years ago |
spqr
|
academic/spqr: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
squizz
|
academic/squizz: Updated for version 0.99d.
|
9 years ago |
staden
|
academic/staden: Updated for version 2.0.0b11.
|
9 years ago |
stellarium
|
academic/stellarium: Updated for version 0.18.1.
|
7 years ago |
suitesparse
|
academic/suitesparse: Updated for version 5.3.0
|
7 years ago |
suitesparseconfig
|
academic/suitesparseconfig: Updated for version 5.2.0.
|
8 years ago |
sundials
|
academic/sundials: Updated for version 3.1.1.
|
7 years ago |
sword
|
academic/sword: Fix for newer icu4c.
|
8 years ago |
sword-data-kjv
|
academic/sword-data-kjv: Updated for version 1.8.1.
|
8 years ago |
sympy
|
academic/sympy: Fix slack-desc.
|
9 years ago |
t_coffee
|
Multiple: update email, year and slack-desc
|
10 years ago |
tabix
|
academic/tabix: Fix slack-desc.
|
9 years ago |
tilem
|
academic/tilem: Allow VERSION override, i486=>i586.
|
9 years ago |
tilem2
|
academic/tilem2: Fix ownership.
|
8 years ago |
tkgate
|
academic/tkgate: Mirror download url.
|
8 years ago |
topdraw
|
Multiple: update email, year and slack-desc
|
10 years ago |
tophat
|
academic/tophat: Force a single make job.
|
8 years ago |
treeviewx
|
academic/treeviewx: Added (Program to display phylogenetic trees).
|
7 years ago |
trfind
|
academic/trfind: Fix executable for use with RepeatMasker.
|
8 years ago |
tuxmath
|
academic/tuxmath: Update homepage.
|
7 years ago |
tuxtype2
|
academic/tuxtype2: Update homepage.
|
7 years ago |
ucsc-blat
|
academic/ucsc-blat: Update HOMEPAGE.
|
9 years ago |
ugene
|
academic/ugene: Updated for version 1.30.0.
|
7 years ago |
umfpack
|
academic/umfpack: BUILD bump for SuiteSparse 5.2.0.
|
8 years ago |
units
|
academic/units: Updated for version 2.17.
|
7 years ago |
vcftools
|
academic/vcftools: Updated for version 0.1.15.
|
8 years ago |
verilog
|
various: Update find command to match template.
|
12 years ago |
veusz
|
academic/veusz: Fix build against new Qt5.
|
7 years ago |
wehi-cellsymphony
|
academic/wehi-cellsymphony: Make .desktop validate.
|
9 years ago |
wehi-deid
|
academic/wehi-deid: Make .desktop validate.
|
9 years ago |
wehi-hackit
|
academic/wehi-hackit: Make .desktop validate.
|
9 years ago |
wehi-weasel
|
academic/wehi-weasel: Updated for version 3.4.2.17.
|
8 years ago |
wmcalc
|
academic/wmcalc: Updated for version 0.7.
|
7 years ago |
wxMaxima
|
academic/wxMaxima: Switch homepage to https.
|
7 years ago |
wxmacmolplt
|
academic/wxmacmolplt: Update doinst.sh.
|
9 years ago |
xcircuit
|
academic/xcircuit: Fix slack-desc.
|
9 years ago |
xephem
|
academic/xephem: Make .desktop validate.
|
9 years ago |
xflr5
|
academic/xflr5: Updated for version 6.42.
|
7 years ago |
xfoil
|
academic/xfoil: Added (program for design and analysis of airfoils).
|
9 years ago |
xiphos
|
academic/xiphos: Updated for version 4.1.0.
|
8 years ago |
xoscope
|
academic/xoscope: Updated for version 2.2.
|
9 years ago |
zotero
|
academic/zotero: Updated for version 5.0.52.
|
7 years ago |