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slackbuilds-current/academic/aline
B. Watson 9a9b8914cb
academic/aline: Fix README. 		9 years ago
..
README academic/aline: Fix README. 9 years ago
References academic/aline: Added (Tk graphical interface for Perl) 13 years ago
aline.SlackBuild Multiple: update email, year and slack-desc 10 years ago
aline.desktop academic/aline: Added (Tk graphical interface for Perl) 13 years ago
aline.info Multiple: update email, year and slack-desc 10 years ago
aline.png academic/aline: Added (Tk graphical interface for Perl) 13 years ago
doinst.sh academic/aline: Added (Tk graphical interface for Perl) 13 years ago
slack-desc Multiple: update email, year and slack-desc 10 years ago

README 

Aline: An Extensible WYSIWYG Protein Sequence Alignment Editor for
Publication Quality Figures.

Aline is an interactive perl/tk application which can read common
sequence alignment formats which the user can then alter, embellish,
markup etc to produce the kind of sequence figure commonly found in
biochemical articles.

NOTE
The default row length is 100 residues. If you want to change that to
something else (e.g. 1000) pass ROW=1000 to the script.

OPTIONAL
Although not needed for running Aline, clustalw and mkDSSP are 
desirable for its complete functionality. A third tool is CHAINSAW,
part of the CCP4 suite (http://www.ccp4.ac.uk/). Visit the web site
for more information and installation instructions if you want it.

CITING
Bond, C.S. and Schuttelkopf, A.W. (2009), Acta cryst. D65, 510-512