Browse Source

All: SlackBuilds run in the directory they are in

Signed-off-by: Heinz Wiesinger <pprkut@slackbuilds.org>

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
pull/128/head
Heinz Wiesinger 4 years ago
committed by Willy Sudiarto Raharjo
parent
commit
7f26b9929f
No known key found for this signature in database GPG Key ID: 3F617144D7238786
  1. 3
      academic/CAFS_divergence/CAFS_divergence.SlackBuild
  2. 3
      academic/CAPS_coevolution/CAPS_coevolution.SlackBuild
  3. 3
      academic/Data2FCS/Data2FCS.SlackBuild
  4. 3
      academic/DendroPy/DendroPy.SlackBuild
  5. 3
      academic/EMBASSY/EMBASSY.SlackBuild
  6. 3
      academic/EMBOSS/EMBOSS.SlackBuild
  7. 3
      academic/FCSalyzer/FCSalyzer.SlackBuild
  8. 3
      academic/FreeFem/FreeFem.SlackBuild
  9. 3
      academic/Gblocks/Gblocks.SlackBuild
  10. 3
      academic/GeoGebra/GeoGebra.SlackBuild
  11. 3
      academic/Gridcoin-Research/Gridcoin-Research.SlackBuild
  12. 3
      academic/HMMER/HMMER.SlackBuild
  13. 3
      academic/IGV/IGV.SlackBuild
  14. 3
      academic/ITK/ITK.SlackBuild
  15. 3
      academic/Kst/Kst.SlackBuild
  16. 3
      academic/MetaPhlAn2/MetaPhlAn2.SlackBuild
  17. 3
      academic/Mnemosyne/Mnemosyne.SlackBuild
  18. 3
      academic/OpenFOAM/OpenFOAM.SlackBuild
  19. 3
      academic/PhyML/PhyML.SlackBuild
  20. 3
      academic/PyAMG/PyAMG.SlackBuild
  21. 3
      academic/QtiPlot/QtiPlot.SlackBuild
  22. 3
      academic/R/R.SlackBuild
  23. 3
      academic/RAxML/RAxML.SlackBuild
  24. 3
      academic/RepeatMasker/RepeatMasker.SlackBuild
  25. 3
      academic/STAR/STAR.SlackBuild
  26. 3
      academic/SU2/SU2.SlackBuild
  27. 3
      academic/SeqMonk/SeqMonk.SlackBuild
  28. 3
      academic/Shark/Shark.SlackBuild
  29. 3
      academic/TreeGraph/TreeGraph.SlackBuild
  30. 3
      academic/ViennaRNA/ViennaRNA.SlackBuild
  31. 3
      academic/WEVOTE/WEVOTE.SlackBuild
  32. 3
      academic/WordNet/WordNet.SlackBuild
  33. 3
      academic/Xyce/Xyce.SlackBuild
  34. 3
      academic/ZeGrapher/ZeGrapher.SlackBuild
  35. 3
      academic/abella/abella.SlackBuild
  36. 3
      academic/abntex/abntex.SlackBuild
  37. 3
      academic/aenig4/aenig4.SlackBuild
  38. 3
      academic/aline/aline.SlackBuild
  39. 3
      academic/aliview/aliview.SlackBuild
  40. 3
      academic/amd/amd.SlackBuild
  41. 3
      academic/amplicon/amplicon.SlackBuild
  42. 3
      academic/amplifx/amplifx.SlackBuild
  43. 3
      academic/antiprism/antiprism.SlackBuild
  44. 3
      academic/archaeopteryx/archaeopteryx.SlackBuild
  45. 3
      academic/aris/aris.SlackBuild
  46. 3
      academic/arka/arka.SlackBuild
  47. 3
      academic/armadillo/armadillo.SlackBuild
  48. 3
      academic/arpack-ng/arpack-ng.SlackBuild
  49. 3
      academic/arpack/arpack.SlackBuild
  50. 3
      academic/artha/artha.SlackBuild
  51. 3
      academic/avl/avl.SlackBuild
  52. 3
      academic/avogadro/avogadro.SlackBuild
  53. 3
      academic/bcftools/bcftools.SlackBuild
  54. 3
      academic/bedGraphToBigWig/bedGraphToBigWig.SlackBuild
  55. 3
      academic/bedtools/bedtools.SlackBuild
  56. 3
      academic/biblesync/biblesync.SlackBuild
  57. 3
      academic/bibletime/bibletime.SlackBuild
  58. 3
      academic/bibus/bibus.SlackBuild
  59. 3
      academic/biopython/biopython.SlackBuild
  60. 3
      academic/boinc/boinc.SlackBuild
  61. 3
      academic/bowtie/bowtie.SlackBuild
  62. 3
      academic/bowtie2-legacy/bowtie2-legacy.SlackBuild
  63. 3
      academic/bowtie2/bowtie2.SlackBuild
  64. 3
      academic/bpp-core/bpp-core.SlackBuild
  65. 3
      academic/bpp-phyl-omics/bpp-phyl-omics.SlackBuild
  66. 3
      academic/bpp-phyl/bpp-phyl.SlackBuild
  67. 3
      academic/bpp-popgen/bpp-popgen.SlackBuild
  68. 3
      academic/bpp-seq-omics/bpp-seq-omics.SlackBuild
  69. 3
      academic/bpp-seq/bpp-seq.SlackBuild
  70. 3
      academic/bpp1.9-numcalc/bpp1.9-numcalc.SlackBuild
  71. 3
      academic/bpp1.9-phyl/bpp1.9-phyl.SlackBuild
  72. 3
      academic/bpp1.9-seq/bpp1.9-seq.SlackBuild
  73. 3
      academic/bpp1.9-utils/bpp1.9-utils.SlackBuild
  74. 3
      academic/bppsuite/bppsuite.SlackBuild
  75. 3
      academic/btf/btf.SlackBuild
  76. 3
      academic/bwa/bwa.SlackBuild
  77. 3
      academic/cadabra2/cadabra2.SlackBuild
  78. 3
      academic/calc/calc.SlackBuild
  79. 3
      academic/calcoo/calcoo.SlackBuild
  80. 3
      academic/camd/camd.SlackBuild
  81. 3
      academic/cap3/cap3.SlackBuild
  82. 3
      academic/cblas/cblas.SlackBuild
  83. 3
      academic/ccolamd/ccolamd.SlackBuild
  84. 3
      academic/cdo/cdo.SlackBuild
  85. 3
      academic/celestia/celestia.SlackBuild
  86. 3
      academic/chartgeany/chartgeany.SlackBuild
  87. 3
      academic/chemtool/chemtool.SlackBuild
  88. 3
      academic/cholmod/cholmod.SlackBuild
  89. 3
      academic/cistrome-CEAS/cistrome-CEAS.SlackBuild
  90. 3
      academic/cistrome-MACS/cistrome-MACS.SlackBuild
  91. 3
      academic/cistrome-conductGO/cistrome-conductGO.SlackBuild
  92. 3
      academic/cistrome-extra/cistrome-extra.SlackBuild
  93. 3
      academic/cistrome-mdseqpos/cistrome-mdseqpos.SlackBuild
  94. 3
      academic/clark-ugene/clark-ugene.SlackBuild
  95. 3
      academic/cld2/cld2.SlackBuild
  96. 3
      academic/clustalo/clustalo.SlackBuild
  97. 3
      academic/clustalw/clustalw.SlackBuild
  98. 3
      academic/clustalx/clustalx.SlackBuild
  99. 3
      academic/colamd/colamd.SlackBuild
  100. 3
      academic/colin/colin.SlackBuild

3
academic/CAFS_divergence/CAFS_divergence.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=CAFS_divergence
BINNAM=cafs
SYSTOS=linux
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/CAPS_coevolution/CAPS_coevolution.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=CAPS_coevolution
VERSION=${VERSION:-2.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/Data2FCS/Data2FCS.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Data2FCS
PRGADD=FCS2Data
VERSION=${VERSION:-1.0}
@ -30,7 +32,6 @@ TAG=${TAG:-_SBo}
ARCH=noarch
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/DendroPy/DendroPy.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=DendroPy
VERSION=${VERSION:-4.4.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/EMBASSY/EMBASSY.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=EMBASSY
VERSION=${VERSION:-6.6.0} # Keep this the same version as EMBOSS
BUILD=${BUILD:-2}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/EMBOSS/EMBOSS.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=EMBOSS
VERSION=${VERSION:-6.6.0}
BUILD=${BUILD:-2}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/FCSalyzer/FCSalyzer.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=FCSalyzer
VERSION=${VERSION:-0.9.22_alpha}
BUILD=${BUILD:-1}
@ -30,7 +32,6 @@ TAG=${TAG:-_SBo}
ARCH=noarch
SRCVER=0.9.22-alpha
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/FreeFem/FreeFem.SlackBuild

@ -23,6 +23,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=FreeFem
VERSION=${VERSION:-4.5}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/Gblocks/Gblocks.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Gblocks
VERSION=${VERSION:-0.91b}
BUILD=${BUILD:-2}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/GeoGebra/GeoGebra.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=GeoGebra
VERSION=${VERSION:-5.0.361.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/Gridcoin-Research/Gridcoin-Research.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Gridcoin-Research
VERSION=${VERSION:-5.3.1.0}
BUILD=${BUILD:-1}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/HMMER/HMMER.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=HMMER
VERSION=${VERSION:-3.3.2}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/IGV/IGV.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=IGV
VERSION=${VERSION:-2.9.4}
BUILD=${BUILD:-1}
@ -38,7 +40,6 @@ if [ "$ARCH" != "x86_64" ]; then
exit 1
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/ITK/ITK.SlackBuild

@ -24,6 +24,8 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=ITK
SRCNAM=InsightToolkit
VERSION=${VERSION:-4.13.2}
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/Kst/Kst.SlackBuild

@ -4,6 +4,8 @@
# Written by Fellype do Nascimento <fellype(at)gmail.com>
# last modification of this build script: 2014/12/10
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Kst
VERSION=${VERSION:-2.0.8}
BUILD=${BUILD:-1}
@ -17,7 +19,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/MetaPhlAn2/MetaPhlAn2.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=MetaPhlAn2
VERSION=${VERSION:-20201202_git4e4416}
BUILD=${BUILD:-1}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
*) ARCH=$( uname -m ) ;;
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/Mnemosyne/Mnemosyne.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Mnemosyne
VERSION=${VERSION:-2.6.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/OpenFOAM/OpenFOAM.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=OpenFOAM
VERSION=${VERSION:-8}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/PhyML/PhyML.SlackBuild

@ -24,6 +24,8 @@
# Thanks to Niels Horn for some handy modifications and corrections.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=PhyML
VERSION=${VERSION:-3.3.20200621}
BUILD=${BUILD:-1}
@ -39,7 +41,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/PyAMG/PyAMG.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=PyAMG
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/QtiPlot/QtiPlot.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=QtiPlot
VERSION=${VERSION:-0.9.8.9}
BUILD=${BUILD:-2}
@ -40,7 +42,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/R/R.SlackBuild

@ -23,6 +23,8 @@
# with this program (most likely, a file named COPYING). If not, see
# <http://www.gnu.org/licenses/>.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=R
VERSION=${VERSION:-4.0.0}
BUILD=${BUILD:-1}
@ -47,7 +49,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/RAxML/RAxML.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=RAxML
VERSION=${VERSION:-8.2.12}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/RepeatMasker/RepeatMasker.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=RepeatMasker
VERSION=${VERSION:-4.1.2_p1}
BUILD=${BUILD:-1}
@ -30,7 +32,6 @@ TAG=${TAG:-_SBo}
ARCH=noarch
SRCVER=4.1.2-p1
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/STAR/STAR.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=STAR
VERSION=${VERSION:-2.7.8a}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/SU2/SU2.SlackBuild

@ -23,6 +23,8 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=SU2
VERSION=${VERSION:-6.2.0}
BUILD=${BUILD:-1}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/SeqMonk/SeqMonk.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=SeqMonk
VERSION=${VERSION:-1.47.1}
BUILD=${BUILD:-1}
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/Shark/Shark.SlackBuild

@ -24,6 +24,8 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Shark
VERSION=${VERSION:-4.0.1}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/TreeGraph/TreeGraph.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=TreeGraph
VERSION=${VERSION:-2.15.0_887_beta}
BUILD=${BUILD:-1}
@ -30,7 +32,6 @@ TAG=${TAG:-_SBo}
ZIPVER=2.15.0-887_beta
ARCH=noarch
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/ViennaRNA/ViennaRNA.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=ViennaRNA
VERSION=${VERSION:-2.4.17}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/WEVOTE/WEVOTE.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=WEVOTE
VERSION=${VERSION:-1.8.0} # The version number is found in "install.sh"
COMMIT=645523db5aba843b2681e83146783b18e92866b1
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/WordNet/WordNet.SlackBuild

@ -5,6 +5,8 @@
# Written by Michael Gabilondo <mgabilo{at}gmail{dot}com>
# This work is in the public domain
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=WordNet
VERSION=${VERSION:-3.0}
BUILD=${BUILD:-2}
@ -18,7 +20,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/Xyce/Xyce.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=Xyce
VERSION=${VERSION:-6.5}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/ZeGrapher/ZeGrapher.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=ZeGrapher
VERSION=${VERSION:-3.0.2}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/abella/abella.SlackBuild

@ -21,12 +21,13 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#==========================VARS
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=abella
VERSION=${VERSION:-2.0.6}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
ARCH=noarch
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/abntex/abntex.SlackBuild

@ -24,6 +24,8 @@
# Slightly modified by Robby Workman <rworkman@slackbuilds.org>
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=abntex
VERSION=${VERSION:-0.9_beta2}
ARCH=noarch
@ -33,7 +35,6 @@ TAG=${TAG:-_SBo}
MAJOR=$(echo $VERSION | cut -d _ -f 1)
MINOR=$(echo $VERSION | cut -d _ -f 2)
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/aenig4/aenig4.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=aenig4
VERSION=${VERSION:-1.04}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/aline/aline.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=aline
VERSION=${VERSION:-1.0.025}
BUILD=${BUILD:-2}
@ -30,7 +32,6 @@ TAG=${TAG:-_SBo}
SRCVER=011208
ARCH=noarch
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/aliview/aliview.SlackBuild

@ -22,12 +22,13 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=aliview
VERSION=${VERSION:-1.27}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/amd/amd.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=amd
SRCNAM=SuiteSparse
SUBDIR=AMD
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/amplicon/amplicon.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=amplicon
VERSION=${VERSION:-b09.1}
BUILD=${BUILD:-2}
@ -29,7 +31,6 @@ TAG=${TAG:-_SBo}
ARCH=noarch
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/amplifx/amplifx.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=amplifx
SRCNAM=AmplifX_Lin_Latest
VERSION=${VERSION:-1.7.0}
@ -30,7 +32,6 @@ TAG=${TAG:-_SBo}
ARCH=i386
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/antiprism/antiprism.SlackBuild

@ -4,6 +4,8 @@
# Written by (Jorge Barros de Abreu) (ficmatin10 at gmail dot com)
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=antiprism
VERSION=${VERSION:-0.23}
BUILD=${BUILD:-1}
@ -17,7 +19,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/archaeopteryx/archaeopteryx.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=archaeopteryx
VERSION=${VERSION:-0.9928b}
BUILD=${BUILD:-1}
@ -31,7 +33,6 @@ SRCNAM=forester
SRCVER=1050
ARCH=noarch
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/aris/aris.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=aris
VERSION=${VERSION:-2.2}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/arka/arka.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=arka
VERSION=${VERSION:-0.11}
BUILD=${BUILD:-3}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/armadillo/armadillo.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=armadillo
VERSION=${VERSION:-8.100.0}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/arpack-ng/arpack-ng.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=arpack-ng
VERSION=${VERSION:-3.8.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/arpack/arpack.SlackBuild

@ -23,6 +23,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=arpack
VERSION=${VERSION:-2.1}
BUILD=${BUILD:-1}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/artha/artha.SlackBuild

@ -4,6 +4,8 @@
#
# Written by Mikhail Zotov <mikhail dot ru at gmail dot com>
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=artha
VERSION=${VERSION:-1.0.5}
BUILD=${BUILD:-1}
@ -17,7 +19,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/avl/avl.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=avl
VERSION=${VERSION:-3.36}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/avogadro/avogadro.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=avogadro
VERSION=${VERSION:-1.2.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bcftools/bcftools.SlackBuild

@ -22,6 +22,8 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bcftools
VERSION=${VERSION:-1.12}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bedGraphToBigWig/bedGraphToBigWig.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bedGraphToBigWig
VERSION=${VERSION:-4}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bedtools/bedtools.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bedtools
DIRNAM=bedtools2
VERSION=${VERSION:-2.30.0}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/biblesync/biblesync.SlackBuild

@ -30,6 +30,8 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=biblesync
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
@ -43,7 +45,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bibletime/bibletime.SlackBuild

@ -29,6 +29,8 @@
# Modified 2018/19/20 by Tim Dickson (dickson.tim@googlemail.com)
# Modified 20200918 by B. Watson <yalhcru@gmail.com>
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bibletime
VERSION=${VERSION:-3.0}
BUILD=${BUILD:-2}
@ -42,7 +44,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bibus/bibus.SlackBuild

@ -27,13 +27,14 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bibus
VERSION=${VERSION:-1.5.2}
ARCH=noarch
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/biopython/biopython.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=biopython
VERSION=${VERSION:-1.78}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/boinc/boinc.SlackBuild

@ -24,6 +24,8 @@
#
# TODO: add rc.boinc.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=boinc
VERSION=${VERSION:-7.16.16}
BRANCH=${BRANCH:-7.16}
@ -39,7 +41,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bowtie/bowtie.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bowtie
VERSION=${VERSION:-1.3.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bowtie2-legacy/bowtie2-legacy.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bowtie2-legacy
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bowtie2/bowtie2.SlackBuild

@ -24,6 +24,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bowtie2
VERSION=${VERSION:-2.4.2}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp-core/bpp-core.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp-core
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp-phyl-omics/bpp-phyl-omics.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp-phyl-omics
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp-phyl/bpp-phyl.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp-phyl
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp-popgen/bpp-popgen.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp-popgen
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp-seq-omics/bpp-seq-omics.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp-seq-omics
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp-seq/bpp-seq.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp-seq
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp1.9-numcalc/bpp1.9-numcalc.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp1.9-numcalc
SRCNAM=bpp-numcalc
VERSION=${VERSION:-1.8.0}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp1.9-phyl/bpp1.9-phyl.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp1.9-phyl
SRCNAM=bpp-phyl
VERSION=${VERSION:-1.9.0}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp1.9-seq/bpp1.9-seq.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp1.9-seq
SRCNAM=bpp-seq
VERSION=${VERSION:-1.7.0}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bpp1.9-utils/bpp1.9-utils.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bpp1.9-utils
SRCNAM=bpp-utils
VERSION=${VERSION:-1.5.0}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/bppsuite/bppsuite.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bppsuite
VERSION=${VERSION:-2.4.1}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/btf/btf.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=btf
SRCNAM=SuiteSparse
SUBDIR=BTF
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/bwa/bwa.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=bwa
VERSION=${VERSION:-0.7.17}
BUILD=${BUILD:-2}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cadabra2/cadabra2.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cadabra2
VERSION=${VERSION:-2.3.6.3}
BUILD=${BUILD:-1}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/calc/calc.SlackBuild

@ -23,6 +23,8 @@
# Modified by Robby Workman <rworkman@slackbuilds.org>
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=calc
VERSION=${VERSION:-2.12.9.1}
BUILD=${BUILD:-1}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/calcoo/calcoo.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=calcoo
VERSION=${VERSION:-2.1.0}
BUILD=${BUILD:-1}
@ -29,7 +31,6 @@ TAG=${TAG:-_SBo}
ARCH=noarch
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/camd/camd.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=camd
SRCNAM=SuiteSparse
SUBDIR=CAMD
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/cap3/cap3.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cap3
VERSION=${VERSION:-20091029} # Use the last modification date as version
BUILD=${BUILD:-2}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cblas/cblas.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cblas
SRCNAM=lapack
VERSION=${VERSION:-3.9.1}
@ -36,7 +38,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/ccolamd/ccolamd.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=ccolamd
SRCNAM=SuiteSparse
SUBDIR=CCOLAMD
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/cdo/cdo.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cdo
VERSION=${VERSION:-1.9.10}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/celestia/celestia.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=celestia
VERSION=${VERSION:-1.6.1}
BUILD=${BUILD:-2}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/chartgeany/chartgeany.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=chartgeany
VERSION=${VERSION:-6.1.5}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/chemtool/chemtool.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=chemtool
VERSION=${VERSION:-1.6.14}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cholmod/cholmod.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cholmod
SRCNAM=SuiteSparse
SUBDIR=CHOLMOD
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/cistrome-CEAS/cistrome-CEAS.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cistrome-CEAS
VERSION=${VERSION:-1.0.2}
BUILD=${BUILD:-2}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cistrome-MACS/cistrome-MACS.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cistrome-MACS
VERSION=${VERSION:-1.4.2}
BUILD=${BUILD:-2}
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cistrome-conductGO/cistrome-conductGO.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cistrome-conductGO
VERSION=${VERSION:-1.0}
BUILD=${BUILD:-1}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cistrome-extra/cistrome-extra.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cistrome-extra
VERSION=${VERSION:-git_20170829_6334683}
BUILD=${BUILD:-1}
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cistrome-mdseqpos/cistrome-mdseqpos.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cistrome-mdseqpos
VERSION=${VERSION:-git_20170829_6334683}
BUILD=${BUILD:-1}
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/clark-ugene/clark-ugene.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=clark-ugene
VERSION=${VERSION:-git_6917bf9}
COMMIT=${COMMIT:-6917bf93df9a8c2b80155db367f6672c1b143d9b}
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/cld2/cld2.SlackBuild

@ -24,6 +24,8 @@
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=cld2
VERSION=${VERSION:-20150820}
SRCREV=b56fa78a2fe44ac2851bae5bf4f4693a0644da7b
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/clustalo/clustalo.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=clustalo
VERSION=${VERSION:-1.2.4}
BUILD=${BUILD:-1}
@ -37,7 +39,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/clustalw/clustalw.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=clustalw
VERSION=${VERSION:-2.1}
BUILD=${BUILD:-2}
@ -35,7 +37,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/clustalx/clustalx.SlackBuild

@ -25,6 +25,8 @@
# With help from http://aur.archlinux.org/packages.php?ID=25080
# PKGBUILD submitter is mickelliot and maintainer is machoo02
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=clustalx
VERSION=${VERSION:-2.1}
BUILD=${BUILD:-1}
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

3
academic/colamd/colamd.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=colamd
SRCNAM=SuiteSparse
SUBDIR=COLAMD
@ -38,7 +40,6 @@ if [ -z "$ARCH" ]; then
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM-$VERSION
OUTPUT=${OUTPUT:-/tmp}

3
academic/colin/colin.SlackBuild

@ -22,6 +22,8 @@
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=colin
VERSION=${VERSION:-1.8.2}
BUILD=${BUILD:-2}
@ -49,7 +51,6 @@ else
LIBDIRSUFFIX=""
fi
CWD=$(pwd)
TMP=${TMP:-/tmp}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}

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